Software

Under constrction……

Databases

• RMDB: an integrated database of single-cytosine-resolution DNA methylation in Oryza sativa.
  Paper: Tiansheng Zhu, Jihong Guan, Hui Liu and and Shuigeng Zhou. RMDB: an integrated database of single-cytosine-resolution DNA methylation in Oryza sativa. To appear in Current Bioinformatics.


• MOBCdb: a comprehensive database integrating multi-omics data on breast cancer for precision medicine.
  Paper: Bingbing Xie#, Zifeng Yuan#, YadongYang, Zhidan Sun, Shuigeng Zhou* and Xiangdong Fang*. MOBCdb: a comprehensive database integrating multi-omics data on breast cancer for precision medicine. Breast Cancer Research and Treatment, 169(3), 625-632, 2018.


• iHMS: a database integrating human histone modification data across developmental stages and tissues.
  Paper: Yanglan Gan, Han Tao, Jihong Guan, Shuigeng Zhou. iHMS: a database integrating human histone modification data across developmental stages and tissues. BMC Bioinformatics, 18(1): 103:1-103:9, 2017.


• MeioBase: a comprehensive database for meiosis.
  Paper: Hao Li, Fanrui Meng, Chunce Guo, Yingxiang Wang, Xiaojing Xie, Tiansheng Zhu, Shuigeng Zhou, Hong Ma, Hongyan Shan and Hongzhi Kong. MeioBase: a comprehensive database for meiosis. Frontiers in Plant Science, Volume 5, Article 728, December 2014.


• miRFANs: an integrated database for Arabidopsis thaliana microRNA function annotations.
  Paper: Hui Liu, Ting Jin, Ruiqi Liao, Linxia Wan, Bin Xu, Shuigeng Zhou* and Jihong Guan. miRFANs: an integrated database for Arabidopsis thaliana microRNA function annotations. BMC Plant Biology, 12:68, 2012.